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  5. Nbi_g05243

Nbi_g05243


Description : not classified & original description: none


Gene families : OG0002687 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002687_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g05243

Target Alias Description ECC score Gene Family Method Actions
Als_g03541 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g04581 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g11223 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g00814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g00896 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g13025 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g46327 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010038 response to metal ion IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016755 aminoacyltransferase activity IEP HCCA
MF GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity IEP HCCA
BP GO:0019748 secondary metabolic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044550 secondary metabolite biosynthetic process IEP HCCA
BP GO:0046937 phytochelatin metabolic process IEP HCCA
BP GO:0046938 phytochelatin biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR025836 Zn_knuckle_CX2CX4HX4C 63 78
IPR025836 Zn_knuckle_CX2CX4HX4C 101 116
IPR001878 Znf_CCHC 125 141
IPR001878 Znf_CCHC 197 211
IPR001878 Znf_CCHC 82 98
IPR001878 Znf_CCHC 44 60
IPR001878 Znf_CCHC 217 232
IPR001878 Znf_CCHC 144 159
No external refs found!