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  5. Nbi_g05233

Nbi_g05233


Description : not classified & original description: none


Gene families : OG0001526 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001526_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g05233
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00250700 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.meiotic... 0.02 OrthoFinder output from all 47 species
AMTR_s00067p00149170 ATSDI1,... Cell cycle.mitosis and meiosis.meiotic... 0.04 OrthoFinder output from all 47 species
AT1G04770 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G48850 ATSDI1 Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 OrthoFinder output from all 47 species
Dcu_g02731 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01011343001 No alias Cell cycle.mitosis and meiosis.meiotic... 0.04 OrthoFinder output from all 47 species
GSVIVT01028569001 ATSDI1 Cell cycle.mitosis and meiosis.meiotic... 0.05 OrthoFinder output from all 47 species
Gb_00951 ATSDI1 Protein POLLENLESS 3-LIKE 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_3682g0010 No alias Protein POLLENLESS 3-LIKE 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_8881560g0010 No alias Protein POLLENLESS 3-LIKE 2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Sam_g29407 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
BP GO:0006751 glutathione catabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016842 amidine-lyase activity IEP HCCA
BP GO:0042219 cellular modified amino acid catabolic process IEP HCCA
BP GO:0043171 peptide catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044273 sulfur compound catabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR019734 TPR_repeat 198 230
No external refs found!