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  5. Nbi_g04879

Nbi_g04879


Description : clade H phosphatase & original description: none


Gene families : OG0001015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001015_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g04879
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Ala_g22837 No alias clade H phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
MA_8944518g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g40473 No alias clade H phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007967_P002 Zm00001e007967 clade H phosphatase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000270 peptidoglycan metabolic process IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0009254 peptidoglycan turnover IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0030203 glycosaminoglycan metabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 73 293
No external refs found!