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  5. Nbi_g04835

Nbi_g04835


Description : ubiquitin-proteasome shuttle factor *(DSK2) & original description: none


Gene families : OG0001912 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001912_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g04835

Target Alias Description ECC score Gene Family Method Actions
Adi_g117313 DSK2 ubiquitin-proteasome shuttle factor *(DSK2) & original... 0.03 OrthoFinder output from all 47 species
Aop_g07304 No alias ubiquitin-proteasome shuttle factor *(DSK2) & original... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000983.16 No alias Ubiquitin domain-containing protein DSK2b OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01023890001 DSK2 Ubiquitin domain-containing protein DSK2b OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Mp1g23030.1 DSK2 autophagic adaptor protein (DSK2) 0.02 OrthoFinder output from all 47 species
Spa_g06039 DSK2 ubiquitin-proteasome shuttle factor *(DSK2) & original... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005801 cis-Golgi network IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR015940 UBA 509 545
IPR000626 Ubiquitin-like_dom 17 85
No external refs found!