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  5. Nbi_g04784

Nbi_g04784 (IAA3, SHY2)


Aliases : IAA3, SHY2

Description : transcriptional repressor *(IAA/AUX) & original description: none


Gene families : OG0000146 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000146_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g04784
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01011841001 IAA32, MEE10 Auxin-responsive protein IAA32 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Lfl_g30688 PAP1, IAA26 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26831 IAA9 transcriptional repressor *(IAA/AUX) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g48216 IAA4, ATAUX2-11 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e018053_P002 IAA16, Zm00001e018053 Auxin-responsive protein IAA30 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072488 ammonium transmembrane transport IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
BP GO:1903825 organic acid transmembrane transport IEP HCCA
BP GO:1905039 carboxylic acid transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 175 478
No external refs found!