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Aliases : CLPR4
Description : non-proteolytic core component *(ClpR) of chloroplast Clp-type protease complex & original description: none
Gene families : OG0000988 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000988_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00164p00068000 | CLPR1, SVR2,... | Protein degradation.peptidase families.serine-type... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G09130 | No alias | ATP-dependent caseinolytic (Clp) protease/crotonase... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G49970 | CLPR1, SVR2, NCLPP5 | CLP protease proteolytic subunit 1 | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g019566 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g052191 | CLPR4 | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g074670 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g07767 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g03866 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g00665 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.05 | OrthoFinder output from all 47 species | |
| Als_g01710 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g02995 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g22566 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g23397 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g15422 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Cre07.g331500 | No alias | Protein degradation.peptidase families.serine-type... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g06754 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g10911 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g02591 | CLPR4 | non-proteolytic core component *(ClpR) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g02711 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g03225 | CLPR4 | non-proteolytic core component *(ClpR) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g21817 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g18668 | CLPR4 | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01003696001 | CLPR4 | Protein degradation.peptidase families.serine-type... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_40312 | CLPR4 | non-proteolytic core component ClpR of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g22430.1 | LOC_Os03g22430 | non-proteolytic core component ClpR of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g51450.1 | CLPR1, SVR2,... | non-proteolytic core component ClpR of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g10203 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g01084 | CLPR4 | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g01473 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g05306 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10429819g0020 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component ClpR of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Mp6g21300.1 | No alias | non-proteolytic core component ClpR of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g00472 | CLPR4 | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g05047 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g06430 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g07323 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g11203 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.06 | OrthoFinder output from all 47 species | |
| Pir_g12837 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g13921 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g56753 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0007.g003581 | CLPR4 | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0008.g004018 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0019.g007703 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g16208 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g17176 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g12805 | CLPR4 | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g22875 | CLPR4 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g02598 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e017288_P001 | CLPR4, Zm00001e017288 | non-proteolytic core component ClpR of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e032571_P001 | CLPR1, SVR2,... | non-proteolytic core component ClpR of chloroplast... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004325 | ferrochelatase activity | IEP | HCCA |
| MF | GO:0004427 | inorganic diphosphate phosphatase activity | IEP | HCCA |
| MF | GO:0004784 | superoxide dismutase activity | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0006783 | heme biosynthetic process | IEP | HCCA |
| BP | GO:0006801 | superoxide metabolic process | IEP | HCCA |
| MF | GO:0016209 | antioxidant activity | IEP | HCCA |
| MF | GO:0016721 | oxidoreductase activity, acting on superoxide radicals as acceptor | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016829 | lyase activity | IEP | HCCA |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | HCCA |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | HCCA |
| BP | GO:0042168 | heme metabolic process | IEP | HCCA |
| BP | GO:0042440 | pigment metabolic process | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| BP | GO:0046148 | pigment biosynthetic process | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| BP | GO:0072593 | reactive oxygen species metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR023562 | ClpP/TepA | 112 | 291 |
| No external refs found! |