Nbi_g04362


Description : not classified & original description: none


Gene families : OG0001961 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001961_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g04362
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00146700 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G79060 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 OrthoFinder output from all 47 species
AT3G50640 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
AT5G19340 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.02 OrthoFinder output from all 47 species
Adi_g116381 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g01320 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g27098 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g03149 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g05194 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g15808 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g40600 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g17811 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g08176 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene54470.t1 Aspi01Gene54470 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61199.t1 Aspi01Gene61199 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.38G065600.1 Ceric.38G065600 not classified & original description: pacid=50580642... 0.02 OrthoFinder output from all 47 species
Dac_g09049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04029 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g06960.1 LOC_Os02g06960 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g52490.2 LOC_Os02g52490 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g46250.1 LOC_Os06g46250 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os09g28520.1 LOC_Os09g28520 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g41660.1 LOC_Os12g41660 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g11864 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03308 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g00615 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ppi_g10676 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g065020.2.1 Solyc02g065020 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g054280.1.1 Solyc06g054280 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc07g066350.1.1 Solyc07g066350 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc10g005610.2.1 Solyc10g005610 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g08388 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05577 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g14730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e012987_P001 Zm00001e012987 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e013706_P001 Zm00001e013706 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e015934_P003 Zm00001e015934 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e025161_P001 Zm00001e025161 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!