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  5. Nbi_g03850

Nbi_g03850


Description : not classified & original description: none


Gene families : OG0007789 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007789_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g03850
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00115p00072410 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Aev_g02604 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0090.g042705 No alias not classified & original description: CDS=627-4181 0.03 OrthoFinder output from all 47 species
Ceric.32G041400.1 Ceric.32G041400 not classified & original description: pacid=50598183... 0.05 OrthoFinder output from all 47 species
Dcu_g08316 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
LOC_Os04g53670.1 LOC_Os04g53670 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Lfl_g02405 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g09996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11407 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g064080.4.1 Solyc07g064080 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Tin_g12823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e041705_P003 Zm00001e041705 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
CC GO:0005751 mitochondrial respiratory chain complex IV IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009555 pollen development IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
CC GO:0045277 respiratory chain complex IV IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR026854 VPS13-like_N 1 102
No external refs found!