Nbi_g03220


Description : Sar1-GTPase-regulating protein *(Sec16) & original description: none


Gene families : OG0001407 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001407_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g03220

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00148170 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.07 OrthoFinder output from all 47 species
AT5G47480 No alias RGPR-related 0.05 OrthoFinder output from all 47 species
Adi_g020088 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.05 OrthoFinder output from all 47 species
Aev_g18515 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.02 OrthoFinder output from all 47 species
Aev_g20694 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.02 OrthoFinder output from all 47 species
Ala_g05052 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g35596 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18271 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.04 OrthoFinder output from all 47 species
Als_g49776 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0781.g086689 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.04 OrthoFinder output from all 47 species
Ceric.06G071900.1 Ceric.06G071900 Sar1-GTPase-regulating protein *(Sec16) & original... 0.07 OrthoFinder output from all 47 species
Dcu_g24242 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.04 OrthoFinder output from all 47 species
Dde_g09502 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01004707001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.05 OrthoFinder output from all 47 species
GSVIVT01018158001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.03 OrthoFinder output from all 47 species
LOC_Os02g01490.1 LOC_Os02g01490 Sar1-GTPase-regulating protein (Sec16) 0.02 OrthoFinder output from all 47 species
LOC_Os06g01650.1 LOC_Os06g01650 Sar1-GTPase-regulating protein (Sec16) 0.04 OrthoFinder output from all 47 species
Lfl_g04293 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.06 OrthoFinder output from all 47 species
MA_10427360g0020 No alias Sar1-GTPase-regulating protein (Sec16) 0.03 OrthoFinder output from all 47 species
Msp_g13522 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.06 OrthoFinder output from all 47 species
Pir_g15145 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.06 OrthoFinder output from all 47 species
Pnu_g17288 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.05 OrthoFinder output from all 47 species
Sam_g49181 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.03 OrthoFinder output from all 47 species
Solyc08g007340.3.1 Solyc08g007340 Sar1-GTPase-regulating protein (Sec16) 0.09 OrthoFinder output from all 47 species
Solyc08g007360.3.1 Solyc08g007360 Sar1-GTPase-regulating protein (Sec16) 0.06 OrthoFinder output from all 47 species
Spa_g22205 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e029805_P005 Zm00001e029805 Sar1-GTPase-regulating protein (Sec16) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR024340 Sec16_CCD 768 878
IPR024298 ACE1_Sec16_Sec31 936 1226
No external refs found!