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  5. Nbi_g03092

Nbi_g03092 (ATROPGEF1, ROPGEF1)


Aliases : ATROPGEF1, ROPGEF1

Description : RopGEF guanine nucleotide exchange factor *(PRONE) & original description: none


Gene families : OG0000396 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000396_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g03092

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00165p00047580 ROPGEF7,... Multi-process regulation.Rop GTPase regulatory... 0.04 OrthoFinder output from all 47 species
AT4G13240 ATROPGEF9, ROPGEF9 RHO guanyl-nucleotide exchange factor 9 0.03 OrthoFinder output from all 47 species
AT5G19560 ATROPGEF10, ROPGEF10 ROP uanine nucleotide exchange factor 10 0.06 OrthoFinder output from all 47 species
Aop_g70258 ROPGEF8, ATROPGEF8 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.03 OrthoFinder output from all 47 species
LOC_Os01g48410.1 ATROPGEF9,... PRONE-type RopGEF guanine nucleotide exchange factor 0.03 OrthoFinder output from all 47 species
Msp_g08115 ATROPGEF1, ROPGEF1 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.03 OrthoFinder output from all 47 species
Solyc07g032730.4.1 ROPGEF8,... PRONE-type RopGEF guanine nucleotide exchange factor 0.03 OrthoFinder output from all 47 species
Zm00001e014205_P002 ROPGEF8,... PRONE-type RopGEF guanine nucleotide exchange factor 0.04 OrthoFinder output from all 47 species
Zm00001e019750_P001 ROPGEF8,... PRONE-type RopGEF guanine nucleotide exchange factor 0.02 OrthoFinder output from all 47 species
Zm00001e020182_P002 ATROPGEF9,... PRONE-type RopGEF guanine nucleotide exchange factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005512 PRONE_dom 122 484
No external refs found!