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  5. Nbi_g02966

Nbi_g02966


Description : not classified & original description: none


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g02966

Target Alias Description ECC score Gene Family Method Actions
Adi_g003400 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g006732 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g049959 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060978 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g066290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g071576 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115322 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115323 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115740 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g117386 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g33033 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18305 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20204 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.15G041200.1 Ceric.15G041200 not classified & original description: pacid=50639654... 0.05 OrthoFinder output from all 47 species
Ceric.16G074500.1 Ceric.16G074500 not classified & original description: pacid=50590002... 0.03 OrthoFinder output from all 47 species
Ceric.1Z076400.1 Ceric.1Z076400 not classified & original description: pacid=50565862... 0.02 OrthoFinder output from all 47 species
Ceric.28G013700.1 Ceric.28G013700 not classified & original description: pacid=50569930... 0.06 OrthoFinder output from all 47 species
Ehy_g05604 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g26125 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_00306 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Gb_16287 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 93.2) 0.02 OrthoFinder output from all 47 species
LOC_Os02g51140.1 LOC_Os02g51140 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g12406 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12998 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g15462 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g23479 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g36163 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g02891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g22859 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g36382 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10429587g0010 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 92.8) 0.06 OrthoFinder output from all 47 species
MA_121889g0010 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 98.2) 0.05 OrthoFinder output from all 47 species
Ore_g17982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13486 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12140 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g13335 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g24807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04078 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013443 No alias not classified & original description: CDS=271-3063 0.03 OrthoFinder output from all 47 species
Sam_g38747 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g005570.4.1 Solyc06g005570 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 81.6) 0.03 OrthoFinder output from all 47 species
Spa_g06576 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g11517 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e015817_P001 Zm00001e015817 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e031088_P005 Zm00001e031088 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 110.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0008658 penicillin binding IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
CC GO:0030684 preribosome IEP HCCA
MF GO:0031406 carboxylic acid binding IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0033293 monocarboxylic acid binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 91 215
No external refs found!