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  5. Nbi_g02771

Nbi_g02771


Description : not classified & original description: none


Gene families : OG0001287 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001287_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g02771
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AT1G35780 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
AT4G39860 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
Ala_g01765 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g09322 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Aop_g39197 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0052.g031570 No alias not classified & original description: CDS=1349-2086 0.03 OrthoFinder output from all 47 species
Ceric.03G036400.1 Ceric.03G036400 not classified & original description: pacid=50572452... 0.04 OrthoFinder output from all 47 species
Ceric.07G018800.1 Ceric.07G018800 not classified & original description: pacid=50626140... 0.03 OrthoFinder output from all 47 species
Dcu_g25876 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11407 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009018001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os02g36500.1 LOC_Os02g36500 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g38310.1 LOC_Os04g38310 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g14907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g31085 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Mp1g05870.1 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Pir_g10098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0048.g013635 No alias not classified & original description: CDS=390-1235 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0107.g020368 No alias not classified & original description: CDS=155-916 0.05 OrthoFinder output from all 47 species
Sam_g38636 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc04g055160.3.1 Solyc04g055160 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Spa_g06610 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g10438 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g15922 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05026 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e007936_P001 Zm00001e007936 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR025131 DUF4057 3 279
No external refs found!