1. Home
  2. Species
  3. Nephrolepis biserrata
  4. Sequence
  5. Nbi_g02457

Nbi_g02457 (SFR6)


Aliases : SFR6

Description : component *(MED16) of tail module of MEDIATOR transcription co-activator complex & original description: none


Gene families : OG0004636 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004636_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g02457

Target Alias Description ECC score Gene Family Method Actions
Cre04.g220600 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01002029001 SFR6 RNA biosynthesis.RNA polymerase II-dependent... 0.03 OrthoFinder output from all 47 species
Ore_g19699 SFR6 component *(MED16) of tail module of MEDIATOR... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0001671 ATPase activator activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!