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Aliases : ATHAM3, HAM3, LOM3
Description : GRAS-type transcription factor & original description: none
Gene families : OG0002830 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002830_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Nbi_g02436 | |
| Cluster | HCCA: Cluster_136 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G45160 | ATHAM1, HAM1, LOM1 | GRAS family transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| AT4G00150 | ATHAM3, HAM3, LOM3 | GRAS family transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g110644 | No alias | GRAS-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.08G011800.1 | HAM2, LOM2,... | GRAS-type transcription factor & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g02718 | No alias | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g03844 | No alias | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01027680001 | ATHAM3, HAM3, LOM3 | RNA biosynthesis.transcriptional activation.GRAS... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g24139 | No alias | GRAS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g44382 | ATHAM3, HAM3, LOM3 | GRAS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g090950.4.1 | ATHAM3, HAM3,... | transcription factor (GRAS) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc08g078800.1.1 | ATHAM3, HAM3,... | transcription factor (GRAS) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g23136 | ATHAM3, HAM3, LOM3 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e000305_P001 | ATHAM3, HAM3,... | transcription factor (GRAS) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e002296_P001 | ATHAM3, HAM3,... | transcription factor (GRAS) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e007302_P001 | ATHAM3, HAM3,... | transcription factor (GRAS) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e015355_P002 | ATHAM3, HAM3,... | transcription factor (GRAS) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e036709_P001 | ATHAM3, HAM3,... | transcription factor (GRAS) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e041505_P001 | ATHAM3, HAM3,... | transcription factor (GRAS) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005202 | TF_GRAS | 602 | 970 |
| No external refs found! |