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  5. Nbi_g02433

Nbi_g02433 (FLD)


Aliases : FLD

Description : flowering time factor *(FLD) & original description: none


Gene families : OG0003252 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003252_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g02433
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00206970 SWP1, ATLSD1,... Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder output from all 47 species
Adi_g058521 FLD flowering time factor *(FLD) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0056.g034245 FLD flowering time factor *(FLD) & original description: CDS=134-2881 0.03 OrthoFinder output from all 47 species
Gb_14064 FLD lysine-specific demethylase (LDL/KDM1) 0.05 OrthoFinder output from all 47 species
LOC_Os04g47270.1 FLD, LOC_Os04g47270 lysine-specific demethylase (LDL/KDM1) 0.03 OrthoFinder output from all 47 species
Mp8g11530.1 FLD lysine-specific demethylase (LDL/KDM1) 0.03 OrthoFinder output from all 47 species
Solyc07g063450.3.1 LDL2, Solyc07g063450 lysine-specific demethylase (LDL/KDM1) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR007526 SWIRM 181 256
IPR002937 Amino_oxidase 282 707
No external refs found!