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  5. Nbi_g02156

Nbi_g02156


Description : subgroup ERF-I transcription factor & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g02156
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00238800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AT2G20880 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G61630 CRF6 cytokinin response factor 6 0.04 OrthoFinder output from all 47 species
AT4G27950 CRF4 cytokinin response factor 4 0.05 OrthoFinder output from all 47 species
AT4G28140 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G34410 RRTF1 redox responsive transcription factor 1 0.03 OrthoFinder output from all 47 species
Adi_g008629 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.03 OrthoFinder output from all 47 species
Aev_g06485 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aev_g09217 ERF110 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17161 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Aev_g18013 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g19208 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.03 OrthoFinder output from all 47 species
Aev_g19822 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aev_g28072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g46572 DEAR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g49009 ORA47 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03052 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g03300 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12983 ATERF8, ATERF-8, ERF8 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aop_g38999 ORA47 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23166.t1 DREB26, Aspi01Gene23166 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000553 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Cba_g69639 Rap2.6L subgroup ERF-X transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G096400.1 ERF-1, ATERF-1,... subgroup ERF-IX transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.24G073300.1 ERF72, EBP,... transcription factor component *(HRE/RAP2.12) of... 0.05 OrthoFinder output from all 47 species
Ceric.25G020600.1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g07398 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.05 OrthoFinder output from all 47 species
Dcu_g14596 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Gb_02790 No alias transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Gb_12583 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_17210 IDD16, AtIDD16 transcription factor (DREB). C2H2 zinc finger... 0.03 OrthoFinder output from all 47 species
Gb_17212 DREB2B, DREB2 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os01g54890.1 ERF-1, ATERF-1,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os02g45420.1 LOC_Os02g45420 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os03g22170.1 HRE2, LOC_Os03g22170 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os05g27930.1 DREB2A, DREB2,... transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os05g49010.1 ERF2, ATERF2,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os05g49700.1 LOC_Os05g49700 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os06g03670.1 DREB1A, ATCBF3,... transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os06g08340.1 LOC_Os06g08340 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Len_g20664 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g22270 ERF110 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g57389 ORA47 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g01837 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Lfl_g03205 CRF3 subgroup ERF-VI transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06043 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16644 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Lfl_g28894 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g31233 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
MA_16778g0010 DREB2A, DREB2 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Ore_g03958 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g01199 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Pir_g18808 DEAR4, RAP2.10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g51434 CBF4, DREB1D transcription factor *(CBF/DREB1) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15405 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc01g091760.3.1 RAP2.11, Solyc01g091760 transcription factor (ERF). transcription factor (ERN1) 0.03 OrthoFinder output from all 47 species
Solyc02g077360.1.1 Solyc02g077360 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc03g093610.1.1 ERF-1, ATERF-1,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc03g119580.1.1 Solyc03g119580 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc04g014530.1.1 ERF1, ATERF1,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc04g071770.3.1 ERF110, Solyc04g071770 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc04g072300.1.1 Solyc04g072300 Ethylene-responsive transcription factor FZP OS=Oryza... 0.02 OrthoFinder output from all 47 species
Solyc05g052030.1.1 Solyc05g052030 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc05g052040.1.1 Solyc05g052040 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Solyc06g068360.3.1 Solyc06g068360 transcription factor (ERF) 0.05 OrthoFinder output from all 47 species
Solyc06g068830.2.1 Solyc06g068830 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc11g006050.1.1 ERF1, ATERF1,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc12g042210.2.1 Solyc12g042210 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Spa_g07893 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g16502 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g16569 CRF3 subgroup ERF-VI transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g21487 RAP2.6 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g24188 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g00486 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Zm00001e000611_P001 HRE1, Zm00001e000611 Ethylene-responsive transcription factor ERF073... 0.02 OrthoFinder output from all 47 species
Zm00001e004048_P002 RAP2.12, Zm00001e004048 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e007352_P001 ERF-1, ATERF-1,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e015946_P001 ERF110, Zm00001e015946 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e034661_P001 ERF110, Zm00001e034661 Ethylene-responsive transcription factor ERF115... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 203 251
No external refs found!