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  5. Nbi_g02020

Nbi_g02020


Description : not classified & original description: none


Gene families : OG0007415 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007415_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g02020
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Adi_g018470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g44832 WIN2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g06577 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g17024 WIN2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21352 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Azfi_s0009.g011838 No alias not classified & original description: CDS=76-1209 0.05 OrthoFinder output from all 47 species
Ceric.12G034500.1 Ceric.12G034500 not classified & original description: pacid=50602319... 0.03 OrthoFinder output from all 47 species
Dac_g22447 WIN2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g26608 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ehy_g10463 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Gb_24778 WIN2 Probable protein phosphatase 2C 45 OS=Oryza sativa... 0.1 OrthoFinder output from all 47 species
Len_g22500 WIN2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g07197 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g18580 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pp3c7_120V3.1 WIN2, Pp3c7_120 Protein phosphatase 2C family protein 0.03 OrthoFinder output from all 47 species
Ppi_g07444 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0067.g016282 No alias not classified & original description: CDS=271-1383 0.06 OrthoFinder output from all 47 species
Sam_g27416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16350 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 107 355
No external refs found!