Nbi_g01865 (ATRAC11, ARAC11,...)

Aliases : ATRAC11, ARAC11, ROP1, ROP1AT, ATROP1

Description : small GTPase *(ROP) & original description: none

Gene families : OG0000503 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000503_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g01865
Cluster	HCCA: Cluster_184

Target	Alias	Description	ECC score	Gene Family Method
AT4G35020	ARAC3, RAC3,...	RAC-like 3	0.02	OrthoFinder output from all 47 species
AT5G45970	ARAC2, RAC2,...	RAC-like 2	0.04	OrthoFinder output from all 47 species
Aev_g23892	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g25534	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g03825	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g06146	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g28429	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g32654	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g48079	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g03079	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene15444.t1	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene35809.t1	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.05	OrthoFinder output from all 47 species
Cba_g14200	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.36G016200.1	ARAC3, RAC3,...	small GTPase *(ROP) & original description:...	0.05	OrthoFinder output from all 47 species
Dac_g03527	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g03585	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g37057	ATRAC11, ARAC11,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g07418	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g51070	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01020653001	ATROP4, ROP4,...	Multi-process regulation.Rop GTPase regulatory...	0.03	OrthoFinder output from all 47 species
GSVIVT01024029001	ATRAC1, ROP3,...	Multi-process regulation.Rop GTPase regulatory...	0.04	OrthoFinder output from all 47 species
LOC_Os02g20850.1	ATRAC1, ROP3,...	small GTPase (ROP)	0.04	OrthoFinder output from all 47 species
LOC_Os02g50860.1	ATRAC8, ATROP10,...	small GTPase (ROP)	0.03	OrthoFinder output from all 47 species
LOC_Os06g12790.1	ATRAC8, ATROP10,...	small GTPase (ROP)	0.03	OrthoFinder output from all 47 species
Lfl_g36377	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g38022	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.06	OrthoFinder output from all 47 species
Msp_g03491	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g11271	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.05	OrthoFinder output from all 47 species
Msp_g38983	ATRAC11, ARAC11,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g04924	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.07	OrthoFinder output from all 47 species
Ppi_g11648	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g14285	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004935	ATROP4, ROP4,...	small GTPase *(ROP) & original description: CDS=382-930	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010162	ATROP4, ROP4,...	not classified & original description: CDS=1-690	0.03	OrthoFinder output from all 47 species
Sam_g04900	No alias	small GTPase *(ROP) & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g07595	No alias	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g23832	No alias	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g27850	No alias	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g51099	No alias	small GTPase *(ROP) & original description: none	0.05	OrthoFinder output from all 47 species
Sam_g51141	No alias	small GTPase *(ROP) & original description: none	0.05	OrthoFinder output from all 47 species
Solyc03g114070.3.1	ATRAC8, ATROP10,...	small GTPase (ROP)	0.01	OrthoFinder output from all 47 species
Spa_g01671	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.06	OrthoFinder output from all 47 species
Spa_g10601	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g36415	ARAC3, RAC3,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g05437	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g05440	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0004519	endonuclease activity	IEP	HCCA
MF	GO:0004650	polygalacturonase activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006308	DNA catabolic process	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
BP	GO:0019439	aromatic compound catabolic process	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0030695	GTPase regulator activity	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	HCCA
BP	GO:0046700	heterocycle catabolic process	IEP	HCCA
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
MF	GO:0140677	molecular function activator activity	IEP	HCCA
MF	GO:0140678	molecular function inhibitor activity	IEP	HCCA
BP	GO:1901361	organic cyclic compound catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	8	178

External Links

No external refs found!

Nbi_g01865 (ATRAC11, ARAC11,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation