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  5. Nbi_g01521

Nbi_g01521


Description : component *(CABIN1) of HIRA chaperone complex & original description: none


Gene families : OG0005055 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005055_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g01521
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
AT4G32820 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Ceric.11G076900.1 Ceric.11G076900 component *(CABIN1) of HIRA chaperone complex & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01035326001 No alias No description available 0.03 OrthoFinder output from all 47 species
Lfl_g16194 No alias component *(CABIN1) of HIRA chaperone complex & original... 0.02 OrthoFinder output from all 47 species
Sam_g18074 No alias component *(CABIN1) of HIRA chaperone complex & original... 0.03 OrthoFinder output from all 47 species
Spa_g26511 No alias component *(CABIN1) of HIRA chaperone complex & original... 0.02 OrthoFinder output from all 47 species
Tin_g11333 No alias component *(CABIN1) of HIRA chaperone complex & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!