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  5. Nbi_g01276

Nbi_g01276 (GDAP1, GC3)


Aliases : GDAP1, GC3

Description : Golgin-type membrane tethering protein *(GC3/GC4) & original description: none


Gene families : OG0004731 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004731_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g01276

Target Alias Description ECC score Gene Family Method Actions
AT2G46180 GC4 golgin candidate 4 0.02 OrthoFinder output from all 47 species
Adi_g012373 GDAP1, GC3 Golgin-type membrane tethering protein *(GC3/GC4) &... 0.03 OrthoFinder output from all 47 species
Ala_g09723 GDAP1, GC3 Golgin-type membrane tethering protein *(GC3/GC4) &... 0.06 OrthoFinder output from all 47 species
Als_g03843 GDAP1, GC3 Golgin-type membrane tethering protein *(GC3/GC4) &... 0.03 OrthoFinder output from all 47 species
Aob_g11454 GDAP1, GC3 Golgin-type membrane tethering protein *(GC3/GC4) &... 0.05 OrthoFinder output from all 47 species
Azfi_s0141.g051342 GC4 Golgin-type membrane tethering protein *(GC3/GC4) &... 0.04 OrthoFinder output from all 47 species
Cba_g01243 GDAP1, GC3 Golgin-type membrane tethering protein *(GC3/GC4) &... 0.03 OrthoFinder output from all 47 species
Ceric.25G063900.1 GDAP1, GC3,... Golgin-type membrane tethering protein *(GC3/GC4) &... 0.04 OrthoFinder output from all 47 species
Cre12.g495800 GC4 Vesicle trafficking.target membrane tethering.Golgi... 0.02 OrthoFinder output from all 47 species
Gb_09656 GC4 golgin (GC3|GC4) 0.02 OrthoFinder output from all 47 species
Lfl_g09469 GDAP1, GC3 Golgin-type membrane tethering protein *(GC3/GC4) &... 0.03 OrthoFinder output from all 47 species
MA_68812g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_9568558g0010 GDAP1, GC3 golgin (GC3|GC4) 0.02 OrthoFinder output from all 47 species
Mp6g07280.1 GDAP1, GC3 golgin (GC3|GC4) 0.04 OrthoFinder output from all 47 species
Solyc01g095210.3.1 GC4, Solyc01g095210 golgin (GC3|GC4) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004181 metallocarboxypeptidase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030131 clathrin adaptor complex IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!