MA_29431g0010


Description : Putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial OS=Arabidopsis thaliana (sp|q9lsq2|pp239_arath : 543.0)


Gene families : OG_01_0011343 (Archaeplastida) Phylogenetic Tree(s): OG_01_0011343_tree ,
OG_02_0011199 (LandPlants) Phylogenetic Tree(s): OG_02_0011199_tree ,
OG_03_0010465 (SeedPlants) Phylogenetic Tree(s): OG_03_0010465_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_29431g0010
Cluster HCCA: Cluster_426

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00184190 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.02 Archaeplastida
Gb_40070 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
Zm00001e002867_P004 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
AT3G16890 PPR40 pentatricopeptide (PPR) domain protein 40 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 319 348
IPR002885 Pentatricopeptide_repeat 486 519
IPR002885 Pentatricopeptide_repeat 350 399
IPR002885 Pentatricopeptide_repeat 595 644
IPR002885 Pentatricopeptide_repeat 665 713
IPR002885 Pentatricopeptide_repeat 527 574
IPR002885 Pentatricopeptide_repeat 739 783
No external refs found!