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  5. Nbi_g00869

Nbi_g00869


Description : not classified & original description: none


Gene families : OG0002523 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002523_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g00869

Target Alias Description ECC score Gene Family Method Actions
AT5G40160 EMB139, EMB506 Ankyrin repeat family protein 0.03 OrthoFinder output from all 47 species
Adi_g032639 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g045216 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07232 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g22836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12249 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g25499 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0371.g067116 EMB16, EMB2036, AKRP not classified & original description: CDS=69-1934 0.03 OrthoFinder output from all 47 species
Cba_g10009 EMB139, EMB506 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G110600.1 Ceric.02G110600 not classified & original description: pacid=50584977... 0.05 OrthoFinder output from all 47 species
Ceric.14G014700.1 Ceric.14G014700 not classified & original description: pacid=50633928... 0.04 OrthoFinder output from all 47 species
Dac_g10355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g33805 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g24387 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g04300.3 EMB16, EMB2036,... Ankyrin repeat domain-containing protein, chloroplastic... 0.06 OrthoFinder output from all 47 species
Len_g59009 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g11402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp4g14600.1 No alias Ankyrin repeat domain-containing protein, chloroplastic... 0.03 OrthoFinder output from all 47 species
Ore_g18520 EMB16, EMB2036, AKRP not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04583 EMB139, EMB506 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09255 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g18957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16350 EMB139, EMB506 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g41339 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010764 No alias not classified & original description: CDS=422-1504 0.03 OrthoFinder output from all 47 species
Sam_g11677 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g18486 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g52287 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g061820.4.1 EMB16, EMB2036,... Ankyrin repeat domain-containing protein, chloroplastic... 0.03 OrthoFinder output from all 47 species
Spa_g15917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47848 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g32282 EMB139, EMB506 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e000291_P001 EMB16, EMB2036,... Ankyrin repeat domain-containing protein, chloroplastic... 0.01 OrthoFinder output from all 47 species
Zm00001e025292_P002 EMB139, EMB506,... Ankyrin repeat domain-containing protein EMB506,... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 293 384
No external refs found!