GSVIVT01028153001


Description : 27.1.2 RNA.processing.RNA helicase RNA helicase family protein


Gene families : OG_01_0000259 (Gene family) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01028153001
Cluster HCCA cluster: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
AT1G27900 No alias RNA helicase family protein 0.03 Gene family
AT1G32490 ESP3, EMB2733 RNA helicase family protein 0.03 Gene family
AT5G13010 EMB3011 RNA helicase family protein 0.02 Gene family
Cpa|evm.model.tig00000842.2 No alias 27.1 RNA.processing ATP-dependent RNA helicase, putative 0.03 Gene family
Cpa|evm.model.tig00000984.27 No alias 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.02 Gene family
Cpa|evm.model.tig00021589.28 No alias 27.1 RNA.processing ATP-dependent RNA helicase, putative 0.01 Gene family
Cpa|evm.model.tig00021589.29 No alias 27.1 RNA.processing ATP-dependent RNA helicase, putative 0.02 Gene family
Cre07.g329150 No alias 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.02 Gene family
Cre07.g349100 No alias 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.02 Gene family
Cre24.g755347 No alias 27.1.2 RNA.processing.RNA helicase embryo defective 3011... 0.02 Gene family
LOC_Os03g19960 Os03g0314100 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.02 Gene family
MA_277016g0010 No alias 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.03 Gene family
Solyc01g079250.3.1 Solyc01g079250.3 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.02 Gene family
Solyc03g115390.3.1 Solyc03g115390.3 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.03 Gene family
Zm00001d011963 GRMZM2G300375 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.03 Gene family
Zm00001d039380 GRMZM2G305060 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.03 Gene family
Zm00001d049980 GRMZM2G121776 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan
MF GO:0005524 ATP binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007502 Helicase-assoc_dom 428 516
IPR011709 DUF1605 578 654
IPR011545 DEAD/DEAH_box_helicase_dom 72 228
No external refs found!