GSVIVT01028104001


Description : 10.6.2 cell wall.degradation.mannan-xylose-arabinose-fucose encodes a protein similar to a beta-xylosidase located in the extracellular matrix. This is a member of glycosyl hydrolase family 3 and has six other closely related members. beta-xylosidase 2 (BXL2)


Gene families : OG_01_0000215 (Gene family) Phylogenetic Tree(s): OG0000215_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01028104001
Cluster HCCA cluster: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g19220 Os01g0296700 10.6.2 cell... 0.03 Gene family
LOC_Os02g51620 Os02g0752200 10.6.2 cell... 0.05 Gene family
LOC_Os04g54810 Os04g0640700 10.6.2 cell... 0.04 Gene family
LOC_Os11g18730 Os11g0291450,... 10.6.2 cell... 0.06 Gene family
LOC_Os11g19210 Os11g0297800 10.6.2 cell... 0.02 Gene family
MA_10436568g0020 No alias 10.6.2 cell... 0.02 Gene family
MA_182289g0020 No alias 10.6.2 cell... 0.02 Gene family
MA_39151g0010 No alias 10.6.2 cell... 0.02 Gene family
MA_6160451g0010 No alias 10.6.2 cell... 0.03 Gene family
MA_99945g0010 No alias 10.6.2 cell... 0.02 Gene family
Solyc01g079570.3.1 Solyc01g079570.3 10.6.2 cell... 0.04 Gene family
Zm00001d002853 GRMZM2G177923 10.6.2 cell... 0.04 Gene family
Zm00001d004626 GRMZM5G829293 10.6.2 cell... 0.02 Gene family
Zm00001d052793 GRMZM2G343828 10.6.2 cell... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan
BP GO:0005975 carbohydrate metabolic process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002772 Glyco_hydro_3_C 395 625
IPR026891 Fn3-like 689 751
IPR001764 Glyco_hydro_3_N 110 351
No external refs found!