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  5. Nbi_g00597

Nbi_g00597


Description : not classified & original description: none


Gene families : OG0002037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002037_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g00597

Target Alias Description ECC score Gene Family Method Actions
Adi_g021817 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g021818 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13335 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g12228 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g01612 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13136 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0760.g085614 OTP82 not classified & original description: CDS=119-1039 0.03 OrthoFinder output from all 47 species
Cba_g00952 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.16G082900.1 OTP82, Ceric.16G082900 not classified & original description: pacid=50589499... 0.03 OrthoFinder output from all 47 species
Ceric.22G033800.1 Ceric.22G033800 not classified & original description: pacid=50614443... 0.03 OrthoFinder output from all 47 species
Dde_g26527 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01020757001 No alias Pentatricopeptide repeat-containing protein At2g41080... 0.02 OrthoFinder output from all 47 species
Lfl_g01202 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g08645 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15703 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014719 OTP82 not classified & original description: CDS=89-988 0.04 OrthoFinder output from all 47 species
Sam_g17797 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g20131 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g04188 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR032867 DYW_dom 305 397
No external refs found!