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  5. Nbi_g00522

Nbi_g00522


Description : subgroup ERF-III transcription factor & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g00522
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00098700 ERF110,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00079p00020610 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
AMTR_s00099p00039760 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AT5G19790 RAP2.11 related to AP2 11 0.03 OrthoFinder output from all 47 species
Adi_g079523 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07933 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Aev_g21334 tny subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aev_g21810 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.05 OrthoFinder output from all 47 species
Ala_g08073 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Ala_g13570 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g19358 WIN1, SHN1 subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g19242 RAP2.11 transcription factor *(ERN1) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g33297 CRF3 subgroup ERF-VI transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g19913 DREB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g33790 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g60426 tny subgroup ERF-III transcription factor & original... 0.07 OrthoFinder output from all 47 species
Ceric.19G028400.1 HRE2, Ceric.19G028400 not classified & original description: pacid=50576636... 0.03 OrthoFinder output from all 47 species
GSVIVT01025461001 RAP2.11 External stimuli response.biotic... 0.03 OrthoFinder output from all 47 species
Gb_19118 ERF-1, ATERF-1 transcription factor (ERF) 0.05 OrthoFinder output from all 47 species
LOC_Os04g46400.1 LOC_Os04g46400 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os09g35010.1 CBF4, DREB1D,... Dehydration-responsive element-binding protein 1B... 0.03 OrthoFinder output from all 47 species
LOC_Os09g35020.1 CBF4, DREB1D,... Dehydration-responsive element-binding protein 1H... 0.03 OrthoFinder output from all 47 species
MA_103035g0010 No alias transcription factor (ERF) 0.06 OrthoFinder output from all 47 species
MA_33689g0010 ERF-1, ATERF-1 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
MA_77420g0010 DRN-LIKE, ESR2,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Mp5g22160.1 ERF110 Ethylene-responsive transcription factor ERF112... 0.01 OrthoFinder output from all 47 species
Pnu_g11378 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pp3c5_11150V3.1 Pp3c5_11150 Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Smo412693 No alias No description available 0.07 OrthoFinder output from all 47 species
Solyc03g026280.3.1 DREB1A, ATCBF3,... transcription factor (DREB). transcription factor (CBF/DREB1) 0.02 OrthoFinder output from all 47 species
Spa_g04379 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Tin_g08312 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.09 OrthoFinder output from all 47 species
Tin_g16261 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g32520 RAP2.6 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Zm00001e001139_P001 DREB26, Zm00001e001139 Ethylene-responsive transcription factor ERF014... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 46 95
No external refs found!