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Description : not classified & original description: none
Gene families : OG0000526 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000526_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Nbi_g00483 | |
| Cluster | HCCA: Cluster_138 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00009p00257810 | evm_27.TU.AmTr_v1... | Remorin OS=Solanum tuberosum | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g014534 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g11599 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g20509 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g12798 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Als_g28781 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g32232 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g50861 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0217.g058560 | No alias | not classified & original description: CDS=1-231 | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.04G101900.1 | Ceric.04G101900 | not classified & original description: pacid=50631891... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.11G018300.1 | Ceric.11G018300 | not classified & original description: pacid=50595329... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.14G035300.1 | Ceric.14G035300 | not classified & original description: pacid=50633681... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.35G046700.1 | Ceric.35G046700 | not classified & original description: pacid=50581722... | 0.07 | OrthoFinder output from all 47 species | |
| Dcu_g13404 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dde_g48279 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01019785001 | No alias | Remorin OS=Solanum tuberosum | 0.03 | OrthoFinder output from all 47 species | |
| Len_g05082 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g08631 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Len_g57392 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g38113 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g00941 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g09048 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g41173 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g06625 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g08904 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0013.g005937 | No alias | not classified & original description: CDS=1-372 | 0.04 | OrthoFinder output from all 47 species | |
| Smo428235 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Solyc05g048820.3.1 | Solyc05g048820 | Remorin OS=Solanum tuberosum (sp|p93788|remo_soltu : 94.0) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g035900.1.1 | Solyc06g035900 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g03405 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| MF | GO:0005199 | structural constituent of cell wall | IEP | HCCA |
| CC | GO:0005576 | extracellular region | IEP | HCCA |
| CC | GO:0005618 | cell wall | IEP | HCCA |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
| BP | GO:0009664 | plant-type cell wall organization | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
| MF | GO:0016762 | xyloglucan:xyloglucosyl transferase activity | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| CC | GO:0030312 | external encapsulating structure | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0045229 | external encapsulating structure organization | IEP | HCCA |
| MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
| CC | GO:0048046 | apoplast | IEP | HCCA |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | HCCA |
| BP | GO:0071555 | cell wall organization | IEP | HCCA |
| BP | GO:0071669 | plant-type cell wall organization or biogenesis | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005516 | Remorin_C | 122 | 221 |
| No external refs found! |