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  5. Ehy_g31799

Ehy_g31799 (UBP19)


Aliases : UBP19

Description : deubiquitinase *(UBP15-21) & original description: none


Gene families : OG0000320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g31799

Target Alias Description ECC score Gene Family Method Actions
AT1G17110 UBP15 ubiquitin-specific protease 15 0.02 OrthoFinder output from all 47 species
AT4G24560 UBP16 ubiquitin-specific protease 16 0.04 OrthoFinder output from all 47 species
Adi_g013897 UBP25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0016.g014375 UBP18 deubiquitinase *(UBP15-21) & original description: CDS=507-3128 0.02 OrthoFinder output from all 47 species
Azfi_s0193.g057119 UBP25 deubiquitinase *(UBP25) & original description: CDS=1845-3893 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000663.67 UBP15 Protein degradation.peptidase families.cysteine-type... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000711.8 UBP25 Protein degradation.peptidase families.cysteine-type... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000734.7 UBP23 Ubiquitin carboxyl-terminal hydrolase 23 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01000696001 UBP15 Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder output from all 47 species
GSVIVT01009158001 UBP16 Protein degradation.peptidase families.cysteine-type... 0.02 OrthoFinder output from all 47 species
LOC_Os05g43480.1 UBP25, LOC_Os05g43480 deubiquitinase (UBP25) 0.03 OrthoFinder output from all 47 species
MA_127079g0010 UBP25 Ubiquitin carboxyl-terminal hydrolase 25 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp2g05560.1 UBP18 deubiquitinase (UBP15-21) 0.02 OrthoFinder output from all 47 species
Pir_g01994 UBP23 deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05280 UBP25 deubiquitinase *(UBP25) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g35057 UBP15 regulatory deubiquitinase *(UBP15) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05297 UBP23 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50169 No alias deubiquitinase *(UBP15-21) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01115 UBP23 deubiquiTinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e024878_P003 UBP15, Zm00001e024878 deubiquitinase (UBP15-21) 0.03 OrthoFinder output from all 47 species
Zm00001e036315_P001 UBP23, Zm00001e036315 deubiquitinase (UBP23) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEA Interproscan
BP GO:0016579 protein deubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 248 551
IPR004027 SEC_C_motif 1016 1034
IPR002893 Znf_MYND 130 167
No external refs found!