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  5. Ehy_g31160

Ehy_g31160 (LOP1, TRN1)


Aliases : LOP1, TRN1

Description : not classified & original description: none


Gene families : OG0000350 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000350_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g31160

Target Alias Description ECC score Gene Family Method Actions
Ala_g19733 LOP1, TRN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09896 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.18G016400.1 Ceric.18G016400 not classified & original description: pacid=50620952... 0.04 OrthoFinder output from all 47 species
Ceric.18G016500.1 Ceric.18G016500 not classified & original description: pacid=50621773... 0.05 OrthoFinder output from all 47 species
Dac_g40627 LOP1, TRN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g12718 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15715 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g57097 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 344 356
IPR001611 Leu-rich_rpt 293 309
IPR001611 Leu-rich_rpt 373 386
IPR001611 Leu-rich_rpt 236 260
No external refs found!