GSVIVT01025432001


Description : 27.1.1 RNA.processing.splicing encodes an SC35-like splicing factor of 30 kD that is localized to the nuclear specks. SC35-like splicing factor 30A (SCL30A)


Gene families : OG_01_0000558 (Gene family) Phylogenetic Tree(s): OG0000558_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01025432001
Cluster HCCA cluster: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AT3G55460 SCL30, At-SCL30 SC35-like splicing factor 30 0.04 Gene family
LOC_Os02g15310 Os02g0252100 27.1.1 RNA.processing.splicing encodes an SC35-like... 0.03 Gene family
LOC_Os03g24890 Os03g0363800 27.1.1 RNA.processing.splicing encodes an SC35-like... 0.03 Gene family
Zm00001d047401 GRMZM2G426229 27.1.1 RNA.processing.splicing Encodes a SR spliceosome... 0.03 Gene family
Zm00001d048609 GRMZM2G145725 27.1.1 RNA.processing.splicing encodes an SC35-like... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000504 RRM_dom 40 78
IPR000504 RRM_dom 90 133
No external refs found!