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  5. Ehy_g26840

Ehy_g26840


Description : not classified & original description: none


Gene families : OG0001010 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001010_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g26840
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00255370 AFP3,... RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.02 OrthoFinder output from all 47 species
AMTR_s00056p00036030 NINJA,... RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.02 OrthoFinder output from all 47 species
AT1G69260 AFP1 ABI five binding protein 0.04 OrthoFinder output from all 47 species
AT3G02140 AFP4, TMAC2 AFP2 (ABI five-binding protein 2) family protein 0.03 OrthoFinder output from all 47 species
AT3G29575 AFP3 ABI five binding protein 3 0.02 OrthoFinder output from all 47 species
Adi_g114664 NINJA transcriptional co-repressor *(AFP/NINJA) & original... 0.03 OrthoFinder output from all 47 species
Ala_g13840 NINJA not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19994 AFP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57739 NINJA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G095100.1 NINJA, Ceric.04G095100 transcriptional co-repressor *(AFP/NINJA) & original... 0.03 OrthoFinder output from all 47 species
Dde_g08294 NINJA transcriptional co-repressor *(AFP/NINJA) & original... 0.03 OrthoFinder output from all 47 species
Dde_g36399 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os07g41160.1 AFP3, LOC_Os07g41160 transcriptional co-repressor (AFP/NINJA) 0.02 OrthoFinder output from all 47 species
Len_g09615 AFP3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g15953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g16879 AFP3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04118 NINJA transcriptional co-repressor *(AFP/NINJA) & original... 0.02 OrthoFinder output from all 47 species
Msp_g37601 AFP3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30382 NINJA not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g30388 NINJA transcriptional co-repressor *(AFP/NINJA) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g19056 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g32749 NINJA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0190.g025253 NINJA not classified & original description: CDS=22-2187 0.02 OrthoFinder output from all 47 species
Smo402278 NINJA RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.04 OrthoFinder output from all 47 species
Solyc05g018320.3.1 NINJA, Solyc05g018320 transcriptional co-repressor (AFP/NINJA) 0.02 OrthoFinder output from all 47 species
Spa_g02907 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e002002_P001 AFP3, Zm00001e002002 transcriptional co-repressor (AFP/NINJA) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0032039 integrator complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR032308 TDBD 167 206
No external refs found!