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  5. Ehy_g22405

Ehy_g22405 (HIRA)


Aliases : HIRA

Description : component *(HIRA) of HIRA chaperone complex & original description: none


Gene families : OG0003681 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003681_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g22405

Target Alias Description ECC score Gene Family Method Actions
Als_g14673 HIRA component *(HIRA) of HIRA chaperone complex & original... 0.02 OrthoFinder output from all 47 species
Aob_g07410 HIRA component *(HIRA) of HIRA chaperone complex & original... 0.02 OrthoFinder output from all 47 species
Aop_g11886 HIRA component *(HIRA) of HIRA chaperone complex & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01036170001 HIRA Chromatin organisation.histone chaperone... 0.03 OrthoFinder output from all 47 species
LOC_Os09g39420.1 HIRA, LOC_Os09g39420 histone chaperone (HIRA) 0.03 OrthoFinder output from all 47 species
MA_44386g0010 HIRA histone chaperone (HIRA) 0.02 OrthoFinder output from all 47 species
Zm00001e016618_P001 HIRA, Zm00001e016618 histone chaperone (HIRA) 0.03 OrthoFinder output from all 47 species
Zm00001e033573_P005 HIRA, Zm00001e033573 histone chaperone (HIRA) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR011494 Hira 700 900
IPR001680 WD40_repeat 117 154
IPR001680 WD40_repeat 341 368
IPR001680 WD40_repeat 58 95
IPR001680 WD40_repeat 159 195
IPR001680 WD40_repeat 16 41
No external refs found!