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  5. Ehy_g21782

Ehy_g21782


Description : not classified & original description: none


Gene families : OG0001451 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001451_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g21782
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AT1G03830 No alias guanylate-binding family protein 0.03 OrthoFinder output from all 47 species
AT5G46070 No alias Guanylate-binding family protein 0.04 OrthoFinder output from all 47 species
Adi_g109266 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06299 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g16605 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g29763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g42924 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0126.g048649 No alias not classified & original description: CDS=1-2652 0.03 OrthoFinder output from all 47 species
Azfi_s0185.g056605 No alias not classified & original description: CDS=339-3572 0.05 OrthoFinder output from all 47 species
Azfi_s4316.g118720 No alias not classified & original description: CDS=46-1086 0.02 OrthoFinder output from all 47 species
Ceric.33G001500.1 Ceric.33G001500 not classified & original description: pacid=50606915... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020999.6 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g20389 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01021122001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os02g20410.1 LOC_Os02g20410 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g16107 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01383 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25158 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g077600.3.1 Solyc02g077600 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc10g008950.3.1 Solyc10g008950 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Tin_g12795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e032422_P001 Zm00001e032422 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR015894 Guanylate-bd_N 1 198
IPR003191 Guanylate-bd/ATL_C 203 519
No external refs found!