GSVIVT01011809001


Description : 28.1 DNA.synthesis/chromatin structure DEA(D/H)-box RNA helicase family protein


Gene families : OG_01_0000624 (Gene family) Phylogenetic Tree(s): OG0000624_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01011809001
Cluster HCCA cluster: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
LOC_Os10g33275 Os10g0471350 28.1 DNA.synthesis/chromatin structure RNA helicase... 0.03 Gene family
Solyc01g006710.3.1 Solyc01g006710.3 28.1 DNA.synthesis/chromatin structure DEA(D/H)-box RNA... 0.02 Gene family
Solyc01g006970.3.1 Solyc01g006970.3 28.1 DNA.synthesis/chromatin structure RNA helicase... 0.06 Gene family
Solyc01g103690.3.1 Solyc01g103690.3 28.1 DNA.synthesis/chromatin structure RNA helicase... 0.06 Gene family
Zm00001d032735 GRMZM2G399212 28.1 DNA.synthesis/chromatin structure RNA helicase... 0.04 Gene family
Zm00001d045376 No alias 28.1 DNA.synthesis/chromatin structure RNA helicase... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan
MF GO:0005524 ATP binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR014720 dsRBD_dom 1093 1155
IPR011709 DUF1605 900 982
IPR001650 Helicase_C 551 681
IPR007502 Helicase-assoc_dom 745 831
IPR011545 DEAD/DEAH_box_helicase_dom 294 444
No external refs found!