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  5. Ehy_g20808

Ehy_g20808 (ATHDA19, HDA1, HD1,...)


Aliases : ATHDA19, HDA1, HD1, ATHD1, HDA19, RPD3A

Description : EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond & original description: none


Gene families : OG0000827 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000827_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g20808
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
Ala_g17266 ATHDA19, HDA1,... EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.02 OrthoFinder output from all 47 species
Als_g25767 ATHDA19, HDA1,... EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.03 OrthoFinder output from all 47 species
Gb_10850 HDA6, RTS1,... class-I histone deacetylase. deacetylase component HDA19... 0.02 OrthoFinder output from all 47 species
LOC_Os06g38470.1 ATHDA19, HDA1,... class-I histone deacetylase. deacetylase component HDA19... 0.03 OrthoFinder output from all 47 species
MA_47814g0010 ATHDA19, HDA1,... class-I histone deacetylase 0.02 OrthoFinder output from all 47 species
Mp1g29190.1 ATHDA19, HDA1,... class-I histone deacetylase. deacetylase component HDA19... 0.02 OrthoFinder output from all 47 species
Msp_g14220 ATHDA19, HDA1,... EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.02 OrthoFinder output from all 47 species
Pir_g09414 HDA09, HDA9 EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.03 OrthoFinder output from all 47 species
Pnu_g13736 HDA09, HDA9 EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.02 OrthoFinder output from all 47 species
Sam_g12093 No alias EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.03 OrthoFinder output from all 47 species
Sam_g17216 No alias EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.02 OrthoFinder output from all 47 species
Solyc06g071680.4.1 HDA6, RTS1,... class-I histone deacetylase 0.02 OrthoFinder output from all 47 species
Tin_g07273 ATHDA19, HDA1,... EC_3.5 hydrolase acTing on carbon-nitrogen bond, other... 0.03 OrthoFinder output from all 47 species
Zm00001e037309_P002 ATHDA19, HDA1,... class-I histone deacetylase. deacetylase component HDA19... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR023801 His_deacetylse_dom 36 324
No external refs found!