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  5. Adi_g128678

Adi_g128678


Description : RNA splicing regulator *(NSR) & original description: none


Gene families : OG0000722 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000722_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g128678

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00116460 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.spliceosome-associated... 0.02 OrthoFinder output from all 47 species
Adi_g006726 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g044793 No alias RNA splicing regulator *(NSR) & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g055617 No alias RNA splicing regulator *(NSR) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g078877 No alias RNA splicing regulator *(NSR) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g11210 No alias RNA splicing regulator *(NSR) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g39765 No alias RNA splicing regulator *(NSR) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001280 No alias RNA splicing regulator *(NSR) & original description:... 0.02 OrthoFinder output from all 47 species
Lfl_g31383 No alias RNA splicing regulator *(NSR) & original description: none 0.03 OrthoFinder output from all 47 species
MA_121360g0010 No alias NSR RNA splicing regulator 0.02 OrthoFinder output from all 47 species
Msp_g24910 No alias RNA splicing regulator *(NSR) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10153 No alias RNA splicing regulator *(NSR) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g17439 No alias RNA splicing regulator *(NSR) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22565 No alias RNA splicing regulator *(NSR) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e024672_P001 Zm00001e024672 NSR RNA splicing regulator 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 136 204
No external refs found!