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  5. Adi_g124944

Adi_g124944


Description : component *(RPP3) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0003859 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003859_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g124944
Cluster HCCA: Cluster_367

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00182570 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
AT4G25890 No alias 60S acidic ribosomal protein family 0.02 OrthoFinder output from all 47 species
Ala_g10658 No alias component *(RPP3) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Als_g06587 No alias component *(RPP3) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Dac_g46271 No alias component *(RPP3) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Dcu_g19693 No alias component *(RPP3) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
LOC_Os06g48780.1 LOC_Os06g48780 component RPP3 of LSU proteome component 0.02 OrthoFinder output from all 47 species
MA_10431312g0020 No alias component RPP3 of LSU proteome component. component... 0.02 OrthoFinder output from all 47 species
Pir_g18566 No alias component *(RPP3) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Solyc07g009330.4.1 Solyc07g009330 component RPP3 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Spa_g04803 No alias component *(RPP3) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Tin_g00251 No alias component *(RPP3) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Zm00001e013180_P001 Zm00001e013180 component RPP3 of LSU proteome component 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0061650 ubiquitin-like protein conjugating enzyme activity IEP HCCA
MF GO:0061657 UFM1 conjugating enzyme activity IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0071568 UFM1 transferase activity IEP HCCA
BP GO:0071569 protein ufmylation IEP HCCA

No InterPro domains available for this sequence

No external refs found!