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  5. Ehy_g20013

Ehy_g20013


Description : methionine-tRNA ligase & original description: none


Gene families : OG0005969 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005969_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g20013

Target Alias Description ECC score Gene Family Method Actions
AT2G40660 No alias Nucleic acid-binding, OB-fold-like protein 0.02 OrthoFinder output from all 47 species
Cre03.g145967 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 OrthoFinder output from all 47 species
LOC_Os01g60660.1 LOC_Os01g60660 methionine-tRNA ligase 0.04 OrthoFinder output from all 47 species
Mp1g14330.1 No alias methionine-tRNA ligase 0.02 OrthoFinder output from all 47 species
Solyc06g048610.3.1 Solyc06g048610 methionine-tRNA ligase 0.03 OrthoFinder output from all 47 species
Zm00001e028847_P003 Zm00001e028847 methionine-tRNA ligase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0070403 NAD+ binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR002547 tRNA-bd_dom 272 367
No external refs found!