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  5. Adi_g117138

Adi_g117138


Description : not classified & original description: none


Gene families : OG0000592 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000592_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g117138

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00031410 evm_27.TU.AmTr_v1... PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
AMTR_s00063p00100200 evm_27.TU.AmTr_v1... PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
AT5G12350 No alias Regulator of chromosome condensation (RCC1) family with... 0.06 OrthoFinder output from all 47 species
AT5G19420 No alias Regulator of chromosome condensation (RCC1) family with... 0.03 OrthoFinder output from all 47 species
Adi_g014208 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g09949 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g32427 No alias regulatory protein *(RLD) of gravity sensing & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene71481.t1 Aspi01Gene71481 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0167.g054488 No alias not classified & original description: CDS=1991-5185 0.06 OrthoFinder output from all 47 species
Ceric.03G014300.1 Ceric.03G014300 not classified & original description: pacid=50572465... 0.03 OrthoFinder output from all 47 species
Ceric.25G075400.1 Ceric.25G075400 not classified & original description: pacid=50594355... 0.05 OrthoFinder output from all 47 species
Ceric.35G058700.1 Ceric.35G058700 not classified & original description: pacid=50582057... 0.03 OrthoFinder output from all 47 species
Cre16.g691050 PRAF1 PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
Ehy_g25466 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001675001 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.04 OrthoFinder output from all 47 species
Gb_13554 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.04 OrthoFinder output from all 47 species
Gb_27545 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species
LOC_Os05g01610.1 PRAF1, LOC_Os05g01610 PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
LOC_Os05g46740.1 LOC_Os05g46740 PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
MA_10430532g0010 PRAF1 PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
MA_54149g0010 PRAF1 PH, RCC1 and FYVE domains-containing protein 1... 0.05 OrthoFinder output from all 47 species
Mp1g24610.1 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species
Ore_g06560 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18195 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13544 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g52662 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo112120 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
Solyc11g065120.3.1 Solyc11g065120 PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
Spa_g05391 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04728 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11713 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007456_P003 PRAF1, Zm00001e007456 PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
Zm00001e018599_P001 Zm00001e018599 PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species
Zm00001e028276_P001 Zm00001e028276 PH, RCC1 and FYVE domains-containing protein 1... 0.06 OrthoFinder output from all 47 species
Zm00001e028312_P001 Zm00001e028312 PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
MF GO:0140612 DNA damage sensor activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140664 ATP-dependent DNA damage sensor activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013591 Brevis_radix_dom 767 821
IPR027988 BRX_N 665 695
IPR000408 Reg_chr_condens 261 310
IPR000408 Reg_chr_condens 92 140
IPR000408 Reg_chr_condens 144 194
IPR000408 Reg_chr_condens 313 362
IPR000408 Reg_chr_condens 367 414
IPR000408 Reg_chr_condens 198 247
IPR000306 Znf_FYVE 418 483
No external refs found!