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  5. Adi_g117018

Adi_g117018 (TOM1, ATTOM1)


Aliases : TOM1, ATTOM1

Description : tobamovirus multiplication replication host factor *(TOM1) & original description: none


Gene families : OG0000961 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000961_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g117018
Cluster HCCA: Cluster_388

Target Alias Description ECC score Gene Family Method Actions
AT1G14530 THH1 Protein of unknown function (DUF1084) 0.01 OrthoFinder output from all 47 species
Ceric.12G010400.1 TOM1, ATTOM1,... tobamovirus multiplication replication host factor... 0.02 OrthoFinder output from all 47 species
Dcu_g06952 TOM1, ATTOM1 tobamovirus multiplication replication host factor... 0.01 OrthoFinder output from all 47 species
Len_g45344 TOM1, ATTOM1 tobamovirus multiplication replication host factor... 0.03 OrthoFinder output from all 47 species
Lfl_g04622 TOM1, ATTOM1 tobamovirus multiplication replication host factor... 0.02 OrthoFinder output from all 47 species
Spa_g26810 TOM1, ATTOM1 tobamovirus multiplication replication host factor... 0.03 OrthoFinder output from all 47 species
Tin_g06508 TOM1, ATTOM1 tobamovirus multiplication replication host factor... 0.02 OrthoFinder output from all 47 species
Tin_g09694 TOM1, ATTOM1 tobamovirus multiplication replication host factor... 0.03 OrthoFinder output from all 47 species
Zm00001e039052_P001 TOM3, Zm00001e039052 TOM1 tobamovirus multiplication replication host factor 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR009457 THH1/TOM1/TOM3_dom 103 372
No external refs found!