Adi_g116543 (AXR6, ATCUL1, CUL1)

Aliases : AXR6, ATCUL1, CUL1

Description : scaffold component *(CUL1) of SCF E3 ubiquitin ligase complexes & original description: none

Gene families : OG0001888 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001888_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Adi_g116543

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00009p00258510	AXR6, ATCUL1,...	Protein degradation.peptide tagging.Ubiquitin...	0.03	OrthoFinder output from all 47 species
Als_g34097	AXR6, ATCUL1, CUL1	scaffold component *(CUL1) of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Als_g52906	AXR6, ATCUL1, CUL1	scaffold component *(CUL1) of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Aop_g01815	AXR6, ATCUL1, CUL1	scaffold component *(CUL1) of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Ceric.27G015900.1	AXR6, ATCUL1,...	scaffold component *(CUL1) of SCF E3 ubiquitin ligase...	0.03	OrthoFinder output from all 47 species
Ceric.28G004800.1	AXR6, ATCUL1,...	scaffold component *(CUL1) of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020563.191	AXR6, ATCUL1, CUL1	Protein degradation.peptide tagging.Ubiquitin...	0.01	OrthoFinder output from all 47 species
GSVIVT01010966001	AXR6, ATCUL1, CUL1	Protein degradation.peptide tagging.Ubiquitin...	0.02	OrthoFinder output from all 47 species
GSVIVT01017738001	AXR6, ATCUL1, CUL1	Protein degradation.peptide tagging.Ubiquitin...	0.02	OrthoFinder output from all 47 species
Gb_16689	AXR6, ATCUL1, CUL1	scaffold component CUL1/CUL2 of SKP1-CUL1-FBX (SCF) E3...	0.03	OrthoFinder output from all 47 species
LOC_Os01g27150.1	AXR6, ATCUL1,...	scaffold component CUL1/CUL2 of SKP1-CUL1-FBX (SCF) E3...	0.02	OrthoFinder output from all 47 species
Mp8g03110.1	AXR6, ATCUL1, CUL1	scaffold component CUL1/CUL2 of SKP1-CUL1-FBX (SCF) E3...	0.03	OrthoFinder output from all 47 species
Pir_g01372	AXR6, ATCUL1, CUL1	scaffold component *(CUL1) of SCF E3 ubiquitin ligase...	0.03	OrthoFinder output from all 47 species
Ppi_g02289	AXR6, ATCUL1, CUL1	scaffold component *(CUL1) of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015031	AXR6, ATCUL1, CUL1	scaffold component *(CUL1) of SCF E3 ubiquitin ligase...	0.03	OrthoFinder output from all 47 species
Smo173394	AXR6, ATCUL1, CUL1	Protein degradation.peptide tagging.Ubiquitin...	0.04	OrthoFinder output from all 47 species
Spa_g25829	AXR6, ATCUL1, CUL1	scaffold component *(CUL1) of SCF E3 ubiquitin ligase...	0.03	OrthoFinder output from all 47 species
Zm00001e027502_P001	AXR6, ATCUL1,...	scaffold component CUL1/CUL2 of SKP1-CUL1-FBX (SCF) E3...	0.02	OrthoFinder output from all 47 species
Zm00001e040431_P004	AXR6, ATCUL1,...	scaffold component CUL1/CUL2 of SKP1-CUL1-FBX (SCF) E3...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
MF	GO:0031625	ubiquitin protein ligase binding	IEA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
MF	GO:0044389	ubiquitin-like protein ligase binding	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000290	deadenylation-dependent decapping of nuclear-transcribed mRNA	IEP	HCCA
BP	GO:0000956	nuclear-transcribed mRNA catabolic process	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006401	RNA catabolic process	IEP	HCCA
BP	GO:0006402	mRNA catabolic process	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006476	protein deacetylation	IEP	HCCA
MF	GO:0008047	enzyme activator activity	IEP	HCCA
MF	GO:0009678	pyrophosphate hydrolysis-driven proton transmembrane transporter activity	IEP	HCCA
BP	GO:0009892	negative regulation of metabolic process	IEP	HCCA
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0010629	negative regulation of gene expression	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
BP	GO:0016570	histone modification	IEP	HCCA
BP	GO:0016575	histone deacetylation	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
BP	GO:0019439	aromatic compound catabolic process	IEP	HCCA
MF	GO:0019829	ATPase-coupled monoatomic cation transmembrane transporter activity	IEP	HCCA
MF	GO:0022853	active monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	HCCA
CC	GO:0033179	proton-transporting V-type ATPase, V0 domain	IEP	HCCA
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	HCCA
BP	GO:0035601	protein deacylation	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
MF	GO:0042625	ATPase-coupled ion transmembrane transporter activity	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
BP	GO:0043085	positive regulation of catalytic activity	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0044093	positive regulation of molecular function	IEP	HCCA
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	HCCA
MF	GO:0044769	ATPase activity, coupled to transmembrane movement of ions, rotational mechanism	IEP	HCCA
BP	GO:0046700	heterocycle catabolic process	IEP	HCCA
MF	GO:0046961	proton-transporting ATPase activity, rotational mechanism	IEP	HCCA
BP	GO:0048519	negative regulation of biological process	IEP	HCCA
BP	GO:0050790	regulation of catalytic activity	IEP	HCCA
BP	GO:0065009	regulation of molecular function	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:0098732	macromolecule deacylation	IEP	HCCA
BP	GO:0110154	RNA decapping	IEP	HCCA
BP	GO:0110156	methylguanosine-cap decapping	IEP	HCCA
MF	GO:0140677	molecular function activator activity	IEP	HCCA
BP	GO:1901361	organic cyclic compound catabolic process	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
BP	GO:1902600	proton transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR019559	Cullin_neddylation_domain	348	410
IPR001373	Cullin_N	12	321

External Links

No external refs found!

Adi_g116543 (AXR6, ATCUL1, CUL1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation