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  5. Adi_g116475

Adi_g116475


Description : not classified & original description: none


Gene families : OG0001738 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001738_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g116475
Cluster HCCA: Cluster_254

Target Alias Description ECC score Gene Family Method Actions
Adi_g004475 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g007502 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g008549 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Adi_g013949 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g017640 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Adi_g027151 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g033427 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g034559 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Adi_g037971 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g039719 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Adi_g044278 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Adi_g044618 No alias not classified & original description: none 0.15 OrthoFinder output from all 47 species
Adi_g044619 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Adi_g046006 No alias not classified & original description: none 0.16 OrthoFinder output from all 47 species
Adi_g046018 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Adi_g048213 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Adi_g049399 No alias not classified & original description: none 0.16 OrthoFinder output from all 47 species
Adi_g052433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058181 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g058820 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Adi_g062216 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Adi_g068727 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Adi_g076539 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g43489 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g37310 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g27941 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene01843.t1 Aspi01Gene01843 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene13120.t1 Aspi01Gene13120 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene21629.t1 Aspi01Gene21629 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene31284.t1 Aspi01Gene31284 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene48589.t1 Aspi01Gene48589 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g25290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g30493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g33715 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.17G018000.1 Ceric.17G018000 not classified & original description: pacid=50618493... 0.1 OrthoFinder output from all 47 species
Dac_g12803 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g13082 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g14314 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g47014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50652 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g50951 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g51376 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Len_g11061 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g22518 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24322 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g19645 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g59395 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g65349 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pp3c1_11720V3.1 Pp3c1_11720 No annotation 0.01 OrthoFinder output from all 47 species
Ppi_g03786 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g12130 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g17016 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g19057 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g30228 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g52520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g19319 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22587 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29303 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g36409 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005162 Retrotrans_gag_dom 99 174
IPR041577 RT_RNaseH_2 1228 1296
IPR001878 Znf_CCHC 403 417
IPR000477 RT_dom 996 1163
No external refs found!