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  5. Adi_g115754

Adi_g115754


Description : not classified & original description: none


Gene families : OG0002231 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002231_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g115754
Cluster HCCA: Cluster_188

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00105p00058690 RACK1B_AT,... Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
AT3G18130 RACK1C_AT receptor for activated C kinase 1C 0.03 OrthoFinder output from all 47 species
Aop_g06871 RACK1C_AT component *(RACK1) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Ceric.02G088700.1 RACK1C_AT,... component *(RACK1) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000169.6 RACK1C_AT Protein biosynthesis.cytosolic ribosome.small subunit... 0.01 OrthoFinder output from all 47 species
Cre06.g278222 RACK1C_AT Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
LOC_Os05g47890.1 RACK1C_AT, LOC_Os05g47890 associated component RACK1 of SSU proteome 0.04 OrthoFinder output from all 47 species
MA_10435947g0010 RACK1B_AT Guanine nucleotide-binding protein subunit beta-like... 0.03 OrthoFinder output from all 47 species
Mp3g15630.1 RACK1C_AT associated component RACK1 of SSU proteome 0.04 OrthoFinder output from all 47 species
Solyc03g119040.3.1 RACK1B_AT, Solyc03g119040 associated component RACK1 of SSU proteome 0.02 OrthoFinder output from all 47 species
Solyc06g069010.3.1 RACK1B_AT, Solyc06g069010 associated component RACK1 of SSU proteome 0.03 OrthoFinder output from all 47 species
Spa_g16013 RACK1C_AT component *(RACK1) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
CC GO:0005751 mitochondrial respiratory chain complex IV IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
CC GO:0045277 respiratory chain complex IV IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!