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  5. Adi_g115514

Adi_g115514


Description : not classified & original description: none


Gene families : OG0000236 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000236_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g115514

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00226120 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00106p00150110 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00138p00069300 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT3G13000 No alias Protein of unknown function, DUF547 0.02 OrthoFinder output from all 47 species
AT5G42690 No alias Protein of unknown function, DUF547 0.03 OrthoFinder output from all 47 species
Adi_g060933 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g13624 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g29125 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g16129 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g21743 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene50311.t2 Aspi01Gene50311 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g009681 No alias not classified & original description: CDS=140-2005 0.03 OrthoFinder output from all 47 species
Cba_g19284 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G063900.1 Ceric.12G063900 not classified & original description: pacid=50600480... 0.02 OrthoFinder output from all 47 species
Dac_g16017 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g06906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06964 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01002886001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01025228001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_16429 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g05480.3 LOC_Os01g05480 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g13130.2 LOC_Os03g13130 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g40420.1 LOC_Os08g40420 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os09g28850.1 LOC_Os09g28850 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g41040.1 LOC_Os10g41040 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_19648g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g27890.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g21403 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g30893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g22667 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001935 No alias not classified & original description: CDS=1-2133 0.02 OrthoFinder output from all 47 species
Sam_g09691 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo424121 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc01g109270.3.1 Solyc01g109270 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc10g051030.2.1 Solyc10g051030 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g26671 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g53943 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005808_P001 Zm00001e005808 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e013087_P001 Zm00001e013087 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e027120_P001 Zm00001e027120 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0043484 regulation of RNA splicing IEP HCCA
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP HCCA
BP GO:0050684 regulation of mRNA processing IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1903311 regulation of mRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006869 DUF547 2 132
No external refs found!