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  5. Adi_g115433

Adi_g115433


Description : regulatory protein of poly(A) RNA polymerase activity & original description: none


Gene families : OG0002071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002071_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g115433

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00165660 evm_27.TU.AmTr_v1... RNA processing.RNA 3-end polyadenylation.poly(A) RNA... 0.03 OrthoFinder output from all 47 species
AMTR_s00008p00267630 evm_27.TU.AmTr_v1... RNA processing.RNA 3-end polyadenylation.poly(A) RNA... 0.02 OrthoFinder output from all 47 species
AT5G51120 ATPABN1, PABN1 polyadenylate-binding protein 1 0.04 OrthoFinder output from all 47 species
Azfi_s0035.g025597 No alias regulatory protein of poly(A) RNA polymerase activity &... 0.04 OrthoFinder output from all 47 species
Azfi_s0127.g048679 No alias regulatory protein of poly(A) RNA polymerase activity &... 0.03 OrthoFinder output from all 47 species
Azfi_s0481.g073123 No alias regulatory protein of poly(A) RNA polymerase activity &... 0.04 OrthoFinder output from all 47 species
Len_g01008 No alias regulatory protein of poly(A) RNA polymerase activity &... 0.03 OrthoFinder output from all 47 species
Spa_g07876 No alias regulatory protein of poly(A) RNA polymerase activity &... 0.03 OrthoFinder output from all 47 species
Zm00001e036139_P002 Zm00001e036139 poly(A) RNA polymerase regulatory protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0016020 membrane IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 98 166
No external refs found!