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  5. Adi_g113698

Adi_g113698


Description : not classified & original description: none


Gene families : OG0004930 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004930_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g113698
Cluster HCCA: Cluster_274

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00047p00074820 SVR7,... Pentatricopeptide repeat-containing protein At4g16390,... 0.02 OrthoFinder output from all 47 species
AMTR_s00149p00067630 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g46580,... 0.03 OrthoFinder output from all 47 species
AMTR_s00149p00067730 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT4G16390 SVR7 pentatricopeptide (PPR) repeat-containing protein 0.02 OrthoFinder output from all 47 species
AT5G46580 No alias pentatricopeptide (PPR) repeat-containing protein 0.02 OrthoFinder output from all 47 species
Als_g01055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07311 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Aop_g08499 EMB2750 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene39761.t1 Aspi01Gene39761 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.15G014300.1 Ceric.15G014300 not classified & original description: pacid=50639905... 0.05 OrthoFinder output from all 47 species
Dac_g15325 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g14136 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g17091 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g07226 SVR7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16017 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003493001 SVR7 Pentatricopeptide repeat-containing protein At4g16390,... 0.04 OrthoFinder output from all 47 species
GSVIVT01003496001 SVR7 Pentatricopeptide repeat-containing protein At4g16390,... 0.01 OrthoFinder output from all 47 species
Gb_19282 No alias Pentatricopeptide repeat-containing protein At5g46580,... 0.02 OrthoFinder output from all 47 species
LOC_Os03g11670.1 SVR7, LOC_Os03g11670 Pentatricopeptide repeat-containing protein ATP4... 0.02 OrthoFinder output from all 47 species
Lfl_g05655 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_283144g0010 No alias Pentatricopeptide repeat-containing protein At5g46580,... 0.03 OrthoFinder output from all 47 species
Mp1g08510.1 No alias Pentatricopeptide repeat-containing protein At5g46580,... 0.04 OrthoFinder output from all 47 species
Msp_g09352 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g01171 SVR7 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g12890 SVR7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35489 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g11215 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo10825 No alias Pentatricopeptide repeat-containing protein At5g46580,... 0.04 OrthoFinder output from all 47 species
Smo442013 No alias Pentatricopeptide repeat-containing protein At5g46580,... 0.05 OrthoFinder output from all 47 species
Solyc08g077140.1.1 Solyc08g077140 Pentatricopeptide repeat-containing protein At5g46580,... 0.03 OrthoFinder output from all 47 species
Solyc11g012670.1.1 SVR7, Solyc11g012670 Pentatricopeptide repeat-containing protein At4g16390,... 0.03 OrthoFinder output from all 47 species
Spa_g04939 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 289 338
IPR002885 Pentatricopeptide_repeat 184 233
IPR002885 Pentatricopeptide_repeat 363 389
IPR002885 Pentatricopeptide_repeat 434 460
IPR002885 Pentatricopeptide_repeat 257 285
IPR002885 Pentatricopeptide_repeat 399 427
No external refs found!