1. Home
  2. Species
  3. Actinostachys digitata
  4. Sequence
  5. Adi_g113323

Adi_g113323


Description : component *(FES1) of FRI-C transcription effector complex & original description: none


Gene families : OG0000859 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000859_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g113323

Target Alias Description ECC score Gene Family Method Actions
AT2G33835 FES1 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.03 OrthoFinder output from all 47 species
Adi_g051625 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g073671 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32464 No alias component *(FES1) of FRI-C transcription effector... 0.02 OrthoFinder output from all 47 species
Cba_g01885 No alias component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
Cba_g12381 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Cba_g23169 No alias component *(FES1) of FRI-C transcription effector... 0.02 OrthoFinder output from all 47 species
Cba_g29388 No alias component *(FES1) of FRI-C transcription effector... 0.02 OrthoFinder output from all 47 species
Cre01.g003450 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g06929 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Dde_g10766 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Ehy_g20643 No alias component *(FES1) of FRI-C transcription effector... 0.02 OrthoFinder output from all 47 species
LOC_Os03g11580.1 LOC_Os03g11580 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g04170.1 LOC_Os08g04170 C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Ore_g08246 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30501 No alias component *(FES1) of FRI-C transcription effector... 0.02 OrthoFinder output from all 47 species
Ore_g44437 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g41479 No alias component *(FES1) of FRI-C transcription effector... 0.02 OrthoFinder output from all 47 species
Sam_g39875 No alias component *(FES1) of FRI-C transcription effector... 0.02 OrthoFinder output from all 47 species
Solyc04g064800.4.1 Solyc04g064800 C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc06g069440.3.1 Solyc06g069440 Zinc finger CCCH domain-containing protein 38... 0.02 OrthoFinder output from all 47 species
Tin_g20286 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
CC GO:0030915 Smc5-Smc6 complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0106068 SUMO ligase complex IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990234 transferase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!