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  5. Ehy_g18862

Ehy_g18862 (RNPS1, SR45)


Aliases : RNPS1, SR45

Description : component *(RNPS1) of RNA quality control Exon Junction complex & original description: none


Gene families : OG0002814 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002814_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g18862

Target Alias Description ECC score Gene Family Method Actions
Als_g12115 RNPS1, SR45 component *(RNPS1) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
MA_10356517g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Mp4g11580.1 RNPS1, SR45 component RNPS1 of RNA quality control Exon Junction complex 0.02 OrthoFinder output from all 47 species
Ore_g10464 RNPS1, SR45 component *(RNPS1) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Sam_g14861 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26477 No alias component *(RNPS1) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Sam_g36997 No alias component *(RNPS1) of RNA quality control Exon Junction... 0.02 OrthoFinder output from all 47 species
Spa_g07701 RNPS1, SR45 component *(RNPS1) of RNA quality control Exon Junction... 0.02 OrthoFinder output from all 47 species
Spa_g07702 RNPS1, SR45 component *(RNPS1) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004455 ketol-acid reductoisomerase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0009081 branched-chain amino acid metabolic process IEP HCCA
BP GO:0009082 branched-chain amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 76 141
No external refs found!