Ehy_g18759

Description : RNA helicase Prp43 of Intron-Lariat Spliceosome complex & original description: none

Gene families : OG0000519 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000519_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ehy_g18759
Cluster	HCCA: Cluster_85

Target	Alias	Description	ECC score	Gene Family Method
Cba_g33796	No alias	RNA helicase Prp43 of Intron-Lariat Spliceosome complex...	0.01	OrthoFinder output from all 39 species
Len_g39083	No alias	RNA helicase Prp43 of Intron-Lariat Spliceosome complex...	0.01	OrthoFinder output from all 39 species
Nbi_g19475	No alias	RNA helicase Prp43 of Intron-Lariat Spliceosome complex...	0.01	OrthoFinder output from all 39 species
Tin_g02106	No alias	RNA helicase Prp43 of Intron-Lariat Spliceosome complex...	0.01	OrthoFinder output from all 39 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0015276	ligand-gated monoatomic ion channel activity	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
MF	GO:0022834	ligand-gated channel activity	IEP	HCCA
MF	GO:0022836	gated channel activity	IEP	HCCA
MF	GO:0022839	monoatomic ion gated channel activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007502	Helicase-assoc_dom	460	548
IPR001650	Helicase_C	266	397
IPR011545	DEAD/DEAH_box_helicase_dom	68	220
IPR011709	DEAD-box_helicase_OB_fold	610	685

External Links

No external refs found!