Adi_g108756 (RPL23AB)

Aliases : RPL23AB

Description : not classified & original description: none

Gene families : OG0001401 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001401_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Adi_g108756

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00069970	RPL23AB,...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.01	OrthoFinder output from all 47 species
Adi_g005345	RPL23AB	component *(uL23) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Ala_g31538	RPL23AB	component *(uL23) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Als_g25154	RPL23AB	component *(uL23) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Aspi01Gene46927.t1	RPL23AB, Aspi01Gene46927	component *(uL23) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Cba_g21462	RPL23AB	component *(uL23) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ceric.14G096300.1	RPL23AB, Ceric.14G096300	component *(uL23) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Dac_g26842	RPL23AB	component *(uL23) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Dcu_g34947	RPL23AB	component *(uL23) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
MA_10430928g0010	RPL23AB	component RPL23a of LSU proteome component	0.01	OrthoFinder output from all 47 species
Mp2g00570.1	RPL23AB	component RPL23a of LSU proteome component	0.01	OrthoFinder output from all 47 species
Ore_g10110	RPL23AB	component *(uL23) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Pp3c12_19360V3.1	RPL23AB, Pp3c12_19360	ribosomal protein L23AB	0.01	OrthoFinder output from all 47 species
Pp3c4_8620V3.1	RPL23AB, Pp3c4_8620	ribosomal protein L23AB	0.01	OrthoFinder output from all 47 species
Sam_g00769	No alias	component *(uL23) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Sam_g06116	No alias	component *(uL23) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
Sam_g06117	No alias	component *(uL23) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
Sam_g36745	No alias	component *(uL23) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Smo271663	RPL23AB	Protein biosynthesis.cytosolic ribosome.large subunit...	0.01	OrthoFinder output from all 47 species
Spa_g45231	RPL23AB	component *(uL23) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Zm00001e039981_P001	RPL23A, RPL23AA,...	no hits & (original description: none)	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004455	ketol-acid reductoisomerase activity	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0009081	branched-chain amino acid metabolic process	IEP	HCCA
BP	GO:0009082	branched-chain amino acid biosynthetic process	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013025	Ribosomal_L25/23	36	97

External Links

No external refs found!

Adi_g108756 (RPL23AB)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation